WEB-based GEne SeT AnaLysis Toolkit
 
Translating gene lists into biological insights...
 


User data and parameters: User data: textAreaUpload.txt, Organism: hsapiens, Id Type: ensembl_gene_stable_id, Ref Set: entrezgene, Significance Level: Top10, Statistics Test: Hypergeometric, MTC: BH, Minimum: 2

This table lists the enriched transcription factor targets (TFT), number of Entrez IDs in your user data set for the TFT, the corresponding Entrez IDs, and the statistics for the enriched TF.
The statistic column lists:
Finally, the number of user gene ids is linked to a table with information about the user ids, and the Entrez IDs are linked to Entrez Gene.

TFT #Gene EntrezGene Statistics
hsa_V$CEBPB_02 4 2997 366 894 6280 C=252;O=4;E=0.33;R=12.22;rawP=0.0003;adjP=0.0198
hsa_V$CEBPB_01 3 222487 2997 199675 C=258;O=3;E=0.34;R=8.95;rawP=0.0046;adjP=0.0343
hsa_V$LMO2COM_01 3 4778 23569 894 C=260;O=3;E=0.34;R=8.89;rawP=0.0047;adjP=0.0343
hsa_V$LYF1_01 3 383 6280 3772 C=262;O=3;E=0.34;R=8.82;rawP=0.0048;adjP=0.0343
hsa_TGASTMAGC_V$NFE2_01 3 4318 23569 8807 C=191;O=3;E=0.25;R=12.10;rawP=0.0020;adjP=0.0343
hsa_V$USF_02 3 54470 54951 2867 C=269;O=3;E=0.35;R=8.59;rawP=0.0052;adjP=0.0343
hsa_RYTTCCTG_V$ETS2_B 6 4318 222487 6280 4210 8807 1441 C=1074;O=6;E=1.39;R=4.30;rawP=0.0026;adjP=0.0343
hsa_V$BACH2_01 3 4318 23569 60675 C=268;O=3;E=0.35;R=8.62;rawP=0.0052;adjP=0.0343
hsa_TATAAA_V$TATA_01 7 6279 23569 338339 3621 60675 6280 4317 C=1276;O=7;E=1.66;R=4.22;rawP=0.0013;adjP=0.0343
hsa_V$ISRE_01 3 64386 54470 60675 C=246;O=3;E=0.32;R=9.39;rawP=0.0041;adjP=0.0343


WebGestalt is currently developed and maintained by Jing Wang and Bing Zhang at the Zhang Lab. Other people who have made significant contribution to the project include Dexter Duncan, Stefan Kirov, Zhiao Shi, and Jay Snoddy.

Funding credits: NIH/NIAAA (U01 AA016662, U01 AA013512); NIH/NIDA (P01 DA015027); NIH/NIMH (P50 MH078028, P50 MH096972); NIH/NCI (U24 CA159988); NIH/NIGMS (R01 GM088822).